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The 50-Pikmin challenge can be completed in any manner of time. Although the minimum for it is 6 days, there are other ways to do it, like completing it in 20 days as shown below.

Walkthrough

Day 1

Impact Site

Day 2

Forest of Hope

Day 3

Forest of Hope

Day 4

Forest Navel

  • Collect Automatic Gear (with 14 reds and 1 yellow)
  • Destroy 2 ramps leading to Fiery Blowhogs (use the reds only)
  • Destroy the ramp leading to the Gravity Jumper (use yellows)
  • Get the Pikmin that collected the Automatic Gear and use them to help destroy the 2 ramps (not the yellow)
  • Collect Gravity Jumper using all of the reds (Destroy the rest of the nearby ramp if necessary)
  • Have the yellows grab 9 Bomb Rocks
  • Destroy Black stone wall nearest to the Beady Long Legs

Day 5

Forest Navel

  • Have yellows grab 6 Bomb Rocks
  • Destroy stone gate next to S.S. Dolphin
  • Destroy White bramble gate next to ship until nearby Pellet Posies grow
  • Kill a Pellet Posy to lure in the Breadbug
  • Kill Breadbug by throwing Pikmin on top of it
  • Collect Space Float
  • Begin to destroy Gate blocking Analog Computer (using Red Pikmin)
  • If time permits, begin building bridge leading to Libra

Day 6

Forest Navel

Day 7

Forest Navel

  • Pull out all Red and Yellow Pikmin
  • Dismiss group near destroyed black stone gate near Beady Long Legs
  • Convert 10 reds into yellows using Golden Candypop Bud
  • Have yellows grab 10 Bomb Rocks
  • Destroy stone wall leading to Beady Long Legs
  • Destroy Black gate nearest to Beady Long Legs
  • Pick 10 yellows and dismiss yellows near Beady Long Legs
  • Lure Beady Long Legs out
  • Kill Beady Long Legs
  • Collect Guard Satellite using reds (distract Sheargrubs)
  • Pull out Blue Pikmin
  • Regroup with Red Pikmin
  • Take all Pikmin to the Libra
  • Collect Libra
  • Convert 10 yellows into reds using Crimson Candypop Bud

Day 8

Distant Spring

Day 9

Distant Spring

NOTE: For time purposes the parts do not need to be completely collected; the parts can be brought close enough to the ship (within the distance from the black stone wall to the ship) for easy collection later when time is available.

  • Continue destroying Bridge to Massage Machine with Blue Pikmin
  • Kill all the Bulbears except the one near the Massage Machine using Red Pikmin
  • Destroy Gate and Ramp near the Armored Canon Beetle arena using reds
  • Collect UV Lamp
  • Finish Destroying Stone wall near the Gluon Drive
  • Collect Bowsprit (distract Shearwigs)
  • Collect Pilot's Seat (distract Shearwigs)

Day 10

Distant Spring

  • Finish destroying bridge to the Massage Machine
  • Convert 34 reds and 6 Yellow Pikmin into Blue Pikmin using the Lapis Lazuli Candypop Bud
  • Pick the 40 blues and flower them
  • Kill the Puffy Blowhog who has the Interstellar Radio (lure it towards the Massage Machine before killing)
  • Collect the Interstellar Radio using 20 blues
  • Collect the Repair-Type Bolt with the remaining blues
  • Collect the Massage Machine
  • Kill the Shearwigs next to the water-based bridge nearest to the Gluon Drive

Day 11

Distant Spring

  • Pull out all the reds and yellows and begin destroying the land based side of the bridge nearest to the Gluon Drive
  • Collect Ionium Jet #2 with 15 blues (distract Water Dumples)
  • Convert 20 blues into yellows in the Lapis Lazuli Candypop Bud and pick them
  • toss the 20 yellows up to the Chronos Reactor to get it down
  • Convert 20 yellows into blues in the Candypop Bud and pick them
  • Collect Chronos Reactor

Day 12

Distant Spring

  • Lure the Yellow Wollywog nearest to the Gluon Drive towards the Zirconium Rotor
  • Pull out all the Pikmin and Destroy the Bridges nearest to the Gluon Drive
  • Collect Gluon Drive
  • Lure the Wollywog that used to be near the Gluon Drive towards the unfurled bridge
  • Lure the Wollywog that is closest to the Zirconium Rotor into the corner where the two tree stumps meet so that it is closer to the Zirconium Rotor
  • Lure the Wollywog that is closest to the white gate blocking the route to the Zirconium Rotor closer to the spot where the Pilot's Seat used to be
  • Destroy the white gate that is blocking the Zirconium Rotor using all the blues
  • Collect Zirconium Rotor using all Blue Pikmin

Day 13

Forest of Hope

  • Pull out all the blues
  • Begin destroying the water gate near the Radiation Canopy using 11 blues
  • Kill the 2 Dwarf Red Bulborbs nearest to the ship
  • Kill the sheargrubs near the bridge (lure the males into the water)
  • Destroy the mainland bridge using all of the blues
  • Begin destroying the bridge to the Sagittarius using 20 blues
  • Push the box blocking the route to the Burrowing Snagrets using the 10 blues that are doing no task
  • Help destroy the Bridge blocking the Sagittarius using the 10 box-pushing blues
  • If the water gate near the Radiation Canopy is destroyed before the Bridge, then begin to destroy the black gate blocking the Radiation Canopy
  • Collect Sagittarius
  • Pull out all the Pikmin
  • Kill the Red Bulborb near the Radiation Canopy
  • Destroy the Black gate Blocking the Radiation Canopy
  • Get the Armored Cannon Beetle to open its wings and then quickly start to collect the Radiation Canopy
  • Distract the Armored Cannon Beetle until the Radiation Canopy is out of its range
  • Continue Collecting the Radiation Canopy

Day 14

Forest of Hope

  • Kill the Burrowing Snagret with the Geiger Counter using blues
  • Collect the Geiger Counter

Day 15

Impact Site

  • Pull out all the Yellow and Blue Pikmin
  • Have the yellows grab 4 Bomb Rocks
  • Destroy the Stone wall
  • Use the remaining Bomb Rocks on the gate and Begin Destroying the gate (with 4 yellows and 21 blues)
  • Kill the Pearly Clamclamp with the Positron Generator using the 20 taskless blues
  • Collect Positron Generator
  • Flower up any unflowered Pikmin

Day 16

Forest Navel

  • Kill the Fiery Blowhog nearest to the undestroyed black stone wall with 5 Red Pikmin
  • Collect Ionium Jet #1 using 15 blues
  • Begin killing the Fiery Blowhog 2nd nearest the ramps with the 5 reds
  • Lure the wollywogs away from the Anti-Dioxin Filter
  • Collect Anti-Dioxin Filter

Day 17

Forest Navel

  • Pull out 30 blues and 5 reds
  • Using the blues, get the Analog Computer out of the water
  • Flip the Iridescent Flint Beetle over to get some nectar
  • Convert 30 blues into reds and pluck
  • Flower up using Flint Beetle nectar
  • Collect Analog Computer

Day 18

Distant Spring

  • Collect any parts not collected, if necessary

Day 19

The Final Trial

  • Destroy all of the obstacle blocking the route to Emperor Bulblax
  • Convert 10 blues into reds
  • Wait until they flower then pick the reds

Day 20

The Final Trial